智慧农业育种平台（IASBreeding） 是一个面向动物和农作物的 AI驱动育种综合分析平台 。平台集成了 10大核心功能模块 涵盖表型清洗校正、基因组数据库管理、亲缘关系矩阵构建（7种）、遗传方差估计（8种方法）、 线性混合模型BLUP遗传评估（BLUP/GBLUP/ssGBLUP）、 13种机器学习非线性预测模型、贝叶斯遗传评估、 分子表型处理与可视化、选配决策优化及基因型填充等功能， 为精准育种提供一站式智能解决方案。 IASBreeding (Intelligent Agricultural Solutions of Breeding) is an AI-driven comprehensive analysis platform for animal and crop breeding. It integrates 10 core functional modules covering phenotype cleaning and correction, genomic database management, relationship matrix construction (7 methods), genetic variance estimation (8 methods), linear mixed model BLUP genetic evaluation (BLUP/GBLUP/ssGBLUP), 13 machine-learning non-linear prediction models, Bayesian genetic evaluation, molecular phenotype processing and visualization, mating decision optimization, and genotype imputation, providing a one-stop intelligent solution for precision breeding.
平台 Platform 特色 Features
融合人工智能与传统遗传学方法，构建高效精准的育种分析体系 Integrating artificial intelligence with traditional genetics to build an efficient and precise breeding analysis system
AI 智能分析 AI-Powered Analysis
集成13种机器学习算法与深度学习模型，实现智能表型预测与遗传评估 Integrates 13 machine learning and deep learning models for intelligent phenotype prediction and genetic evaluation
C++ 高性能内核 C++ High-Performance Core
核心算法基于C++开发，支持大规模基因组数据的高效计算与分析 Core algorithms developed in C++ for efficient computation on large-scale genomic data
模块化架构 Modular Architecture
8大功能模块独立运行、互相协同，满足育种全流程分析需求 8 core modules that run independently yet work together, covering the full breeding analysis workflow
云端零部署 Zero-Deployment Cloud
基于Web的在线分析平台，无需安装配置，打开浏览器即可使用 Web-based online analysis platform — no installation or configuration, just open your browser
核心 Core 模块 Modules
覆盖育种全流程的十大智能分析模块 Ten intelligent analysis modules covering the entire breeding workflow
涵盖表型统计、清洗校验、变换处理、校正固定效应的高效表现处理平台。 An efficient phenotype processing platform covering statistics, cleaning and validation, transformation, and fixed-effect correction.
融合表型、系谱、基因组与多组学数据、打造育种管理、遗传评估与智能决策一体化平台。 Integrates phenotype, pedigree, genomic and multi-omics data into a unified platform for breeding management, genetic evaluation, and intelligent decision-making.
面向动植物育种的大规模遗传评估平台，集成亲缘关系矩阵构建、REML方差组分估计与育种值预测，支持ABLUP、GBLUP和单步ssGBLUP。 Large-scale genetic evaluation platform for animal and plant breeding, integrating relationship matrix construction, REML variance component estimation, and breeding value prediction, supporting ABLUP, GBLUP, and single-step ssGBLUP.
育种选配决策软件，优化农畜繁殖策略，支持系谱检查、个体近交系数计算、公母组合后代近交预测，以及共同祖先约束与近交阈值约束下的智能选配方案生成。 Mating decision software that optimizes breeding strategies, supporting pedigree checks, individual inbreeding coefficient calculation, progeny inbreeding prediction for sire-dam combinations, and intelligent mating plan generation under common-ancestor and inbreeding-threshold constraints.
提供SVM、Ridge、Lasso、ElasticNet、Random Forest、LightGBM、XGBoost、CNN、MLP等13种机器学习算法用于基因组表型预测。 Provides 13 machine learning algorithms — SVM, Ridge, Lasso, ElasticNet, Random Forest, LightGBM, XGBoost, CNN, MLP, and more — for genomic phenotype prediction.
综合关联分析与QTL定位平台，集成LM、LMM、FastLMM、FarmCPU、BLINK等多种GWAS模型，支持协变量、LOCO、Batch扫描与Manhattan/QQ可视化。 Comprehensive association analysis and QTL mapping platform integrating LM, LMM, FastLMM, FarmCPU, BLINK and other GWAS models, with support for covariates, LOCO, batch scans, and Manhattan/QQ visualization.
贝叶斯遗传评估软件，支持BayesA、BayesB、BayesC、BayesCπ、BSLMM等多种贝叶斯字母模型，适用于基因组选择分析。 Bayesian genetic evaluation software supporting BayesA, BayesB, BayesC, BayesCπ, BSLMM and other Bayesian alphabet models for genomic selection analysis.
分子表型数据（包括转录组、代谢组、蛋白组、微生物组等）处理工具，涵盖数据过滤、校正、分子系谱构建等功能，基于C++开发，高效处理大规模分子表型数据。 Processing tool for molecular phenotype data (transcriptomics, metabolomics, proteomics, microbiome, etc.), covering data filtering, correction, and molecular pedigree construction. Developed in C++ for efficient large-scale processing.
分子表型QTL可视化工具，以直观的热力图与曼哈顿图展示QTL定位结果，支持多种基因组图谱可视化分析。 Visualization tool for molecular phenotype QTL, displaying mapping results with intuitive heatmaps and Manhattan plots, supporting various genome map visualizations.
基因型填充平台，支持多种基因型格式，精准填充缺失基因型数据，适用于牛、鸭等多物种基因组研究与育种改良。 Genotype imputation platform supporting multiple genotype formats, accurately filling missing genotypes for multi-species genomic research and breeding improvement (e.g., cattle, duck).
禽蛋表型智能测定软件，基于计算机视觉与AI算法，自动识别与测量禽蛋外形参数，实现快速精准表型采集。 Intelligent poultry egg phenotype measurement software based on computer vision and AI, automatically recognizing and measuring egg shape parameters for fast, accurate phenotyping.
